Samples for Analysis
Genomenal supports FASTQ, BAM, VCF, TXT, TSV file formats:
FASTQ file(s) with reads obtained by sequencing. In this case, a sample is either a single file (in the case of single-read sequencing), or a pair of files (in the case of paired-end sequencing).
VCF file with variant annotation.
BAM file with aligned sequences.
Tab-delimited files with genotype data (TXT, TSV formats representing 23andMe or alike genotype data).
note
Genomenal can recognize compressed files (GZIP, ZIP, BZIP2, 7-ZIP, XZ, WIM, RAR).
tip
If you have a pair of tumor/normal samples, use FASTQ or BAM files.
tip
If the purpose of your analysis is copy number variations (CNV) discovery, use FASTQ or BAM files.